DFCI M.grisea Gene Index

Magnaporthe_grisea in Wikipedia

About MgGI Gene Index

Development and Goals Background Information about MgGI
Release Summary display a statistical summary of all MgGI releases
Category Comparison display estimated number of genes among all fungi releases

Sequence Similarity Search

BLAST search TC sequences based on sequence similarity

Sequence Reports

Identifiers or Keywords search TC reports using TC identifiers, GB accessions or keywords
TC Annotator list all TC annotation
EST Annotator list all EST annotation
Libraries search EST libraries by keywords or tissue origins
CAT# Download download EST and TC sequences originating from one library

Functional Annotation and Analysis

Alternative Splice Forms prediction of alternative splice variants
EST Expression compare EST expression between different libraries or tissues
Gene Ontology classification of TCs by GO vocabularies
Metabolic Pathways association of TCs with metabolic and signaling pathways
Oligomer Prediction list all 70-mer oligo predictions

Other

Nature Genome Directory

Release 6.0
(May 23, 2009)

Input Sequences

ESTs 87403
ETs 25392

Output Sequences

TC sequences 13984
singleton ESTs 10760
singleton ETs 5964

Total unique: 30708

Attributions

A significant number of ESTs used to construct this index were generated by:

Department of Plant Pathology & Microbiology, Texas A&M University

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Acknowledgements
   The Gene Index Project is supported in part by funding from the US National Science Foundation through grant #DBI-0552416.