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DFCI Morning_glory Gene Index

Ipomoea_nil in Wikipedia

About IpniGI Gene Index
Development and Goals Background Information about IpniGI
Release Summary display a statistical summary of all IpniGI releases
Category Comparison display estimated number of genes among all plant releases

Sequence Similarity Search
BLAST search TC sequences based on sequence similarity

Sequence Reports
Identifiers or Keywords search TC reports using TC identifiers, GB accessions or keywords
TC Annotator list all TC annotation
EST Annotator list all EST annotation
Libraries search EST libraries by keywords or tissue origins
CAT# Download download EST and TC sequences originating from one library

Functional Annotation and Analysis
Alternative Splice Forms prediction of alternative splice variants
EST Expression compare EST expression between different libraries or tissues
Gene Ontology classification of TCs by GO vocabularies
Metabolic Pathways association of TCs with metabolic and signaling pathways
Oligomer Prediction list all 70-mer oligo predictions

Release 1.0
(June 30, 2008)

Input Sequences
ESTs 61199
ETs 133

Output Sequences
TC sequences 11754
singleton ESTs 9721
singleton ETs 39

Total unique: 21514

Attributions

A significant number of ESTs used to construct this index were generated by:

National Institute of Genetics (Japan)

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Acknowledgements
   The Gene Index Project is supported in part by funding from the US National Science Foundation through grant #DBI-0552416.