DFCI Mouse Gene Index

Mus_musculus in Wikipedia

About MGI Gene Index

Development and Goals Background Information about MGI
Release Summary display a statistical summary of all MGI releases
Category Comparison display estimated number of genes among all animal releases

Sequence Similarity Search

BLAST search TC sequences based on sequence similarity

Sequence Reports

Identifiers or Keywords search TC reports using TC identifiers, GB accessions or keywords
TC Annotator list all TC annotation
EST Annotator list all EST annotation
Libraries search EST libraries by keywords or tissue origins
CAT# Download download EST and TC sequences originating from one library

Functional Annotation and Analysis

Alternative Splice Forms prediction of alternative splice variants
EST Expression compare EST expression between different libraries or tissues
Gene Ontology classification of TCs by GO vocabularies
Metabolic Pathways association of TCs with metabolic and signaling pathways
Oligomer Prediction list all 70-mer oligo predictions
Radiation Hybrid Maps mapping TCs against radiation hybrid maps

Release 16.0
(July 27, 2006)

Input Sequences

ESTs 4591294
ETs 173495

Output Sequences

TC sequences 210249
singleton ESTs 769704
singleton ETs 10684

Total unique: 990637

Attributions

A significant number of ESTs used to construct this index were generated by:

Washington University School of Medicine, Genome Sequencing Center
The National Institute on Aging (NIA)
RIKEN (The Institute of Physical and Chemical Research)

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Acknowledgements
   The Gene Index Project is supported in part by funding from the US National Science Foundation through grant #DBI-0552416.