DFCI - Potato_late_blight Gene Index

The Gene Index Project

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DFCI Potato_late_blight Gene Index

Phytophthora_infestans in Wikipedia
About PhinGI Gene Index
Development and Goals	Background Information about PhinGI
Release Summary	display a statistical summary of all PhinGI releases
Category Comparison	display estimated number of genes among all fungi releases
Sequence Similarity Search
BLAST	search TC sequences based on sequence similarity
Sequence Reports
Identifiers or Keywords	search TC reports using TC identifiers, GB accessions or keywords
TC Annotator	list all TC annotation
EST Annotator	list all EST annotation
Libraries	search EST libraries by keywords or tissue origins
CAT# Download	download EST and TC sequences originating from one library
Functional Annotation and Analysis
Alternative Splice Forms	prediction of alternative splice variants
EST Expression	compare EST expression between different libraries or tissues
Gene Ontology	classification of TCs by GO vocabularies
Metabolic Pathways	association of TCs with metabolic and signaling pathways

Release 1.0
(July 1, 2008)

Input Sequences
ESTs	90287
ETs	184
Output Sequences
TC sequences	12149
singleton ESTs	24321
singleton ETs	1
Total unique: 36471

Attributions

A significant number of ESTs used to construct this index were generated by:

Center for Plant Cell Biology, University of California - Riverside

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Acknowledgements
	The Gene Index Project is supported in part by funding from the US National Science Foundation through grant #DBI-0552416.