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DFCI Prickly_lettuce Gene Index

Lactuca_serriola in Wikipedia

About LaseGI Gene Index
Development and Goals Background Information about LaseGI
Release Summary display a statistical summary of all LaseGI releases
Category Comparison display estimated number of genes among all plant releases

Sequence Similarity Search
BLAST search TC sequences based on sequence similarity

Sequence Reports
Identifiers or Keywords search TC reports using TC identifiers, GB accessions or keywords
TC Annotator list all TC annotation
EST Annotator list all EST annotation
Libraries search EST libraries by keywords or tissue origins
CAT# Download download EST and TC sequences originating from one library

Functional Annotation and Analysis
Alternative Splice Forms prediction of alternative splice variants
EST Expression compare EST expression between different libraries or tissues
Gene Ontology classification of TCs by GO vocabularies
Metabolic Pathways association of TCs with metabolic and signaling pathways
Oligomer Prediction list all 70-mer oligo predictions

Release 1.0
(June 28, 2008)

Input Sequences
ESTs 55368
ETs 0

Output Sequences
TC sequences 8047
singleton ESTs 13958
singleton ETs 0

Total unique: 22005

Attributions

A significant number of ESTs used to construct this index were generated by:

University of California at Davis (UCD)

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Acknowledgements
   The Gene Index Project is supported in part by funding from the US National Science Foundation through grant #DBI-0552416.