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The Gene Signature DataBase is a searchable database of fully traceable, standardized, annotated gene signatures which have been manually curated from publications that are indexed in PubMed. Enter a search term above to get started.
News
September, 2011: GeneSigDB Data and Website Update
We continue to expand. So far we have read and processed almost 3,000 publications to extract 3,515 genes signatures from 1,604 publications. See GeneSigDB Release 4 release notes
We have a new tag cloud Browse feature to enable easy browsing of GeneSigDB.
Additional download formats. Download GeneSigDB as an R/Bioconductor data file, gmt or compressed flat file formats.
GeneSigDB Data Release 4
| Gene Signatures: | 3515 |
|---|---|
| Published Articles: | 1604 |
| Genes (Human): | 20,523 |
| Tissues and Diseases: | More than 50 |
| Species: | 3 |
We would be very grateful if you cite GeneSigDB. Culhane AC, Schröder MS, Sultana R, Picard SC, Martinelli EN, Kelly C, Haibe-Kains B, Kapushesky M, St Pierre AA, Flahive W, Picard KC, Gusenleitner D, Papenhausen G, O'Connor N, Correll M, Quackenbush J GeneSigDB: a manually curated database and resource for analysis of gene expression signatures
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Nucleic Acids Research 2012 Jan; 40(Database issue): D1060-6.