Tentative Ortholog 1041098
|
| Sequence1 | Sequence2 | % Identity | Match length | p-value | Recip. best hits |
| Lettuce|TC12392 | Barley|TC142215 | 65 | 473 | 1.4e-29 | |
| Maize|TC281862 | Barley|TC142215 | 85 | 1180 | 1.9e-190 | * |
| Maize|TC281862 | Lettuce|TC12392 | 67 | 477 | 3.1e-33 | * |
| Maize|TC281862 | Mosquito|TC122735 | 59 | 487 | 6.7e-11 | |
| Rice|TC291772 | Barley|TC142215 | 86 | 1178 | 7.7e-197 | * |
| Rice|TC291772 | Maize|TC281862 | 83 | 1600 | 5.1e-248 | * |
| Rice|TC291772 | Mosquito|TC122735 | 60 | 487 | 1.3e-11 | * |
| S.officinarum|TC65003 | Barley|TC142215 | 82 | 977 | 3.0e-141 | * |
| S.officinarum|TC65003 | Lettuce|TC12392 | 66 | 477 | 2.4e-32 | * |
| S.officinarum|TC65003 | Maize|TC281862 | 92 | 1013 | 2.9e-187 | * |
| S.officinarum|TC65003 | Mosquito|TC122735 | 59 | 487 | 2.6e-12 | * |
| S.officinarum|TC65003 | Rice|TC291772 | 83 | 1015 | 8.2e-151 | * |
| S.officinarum|TC65003 | Sorghum|TC102557 | 95 | 1338 | 3.2e-266 | * |
| Sorghum|TC102557 | Barley|TC142215 | 85 | 1209 | 3.1e-195 | * |
| Sorghum|TC102557 | Lettuce|TC12392 | 66 | 494 | 2.9e-32 | * |
| Sorghum|TC102557 | Maize|TC281862 | 93 | 1689 | 0. | * |
| Sorghum|TC102557 | Mosquito|TC122735 | 59 | 487 | 3.5e-12 | * |
| Sorghum|TC102557 | Rice|TC291772 | 83 | 1699 | 3.9e-260 | * |
| Wheat|TC254774 | Barley|TC142215 | 94 | 847 | 2.0e-166 | * |
| Wheat|TC254774 | Lettuce|TC12392 | 64 | 477 | 1.9e-27 | * |
| Wheat|TC254774 | Maize|TC281862 | 82 | 654 | 5.1e-95 | * |
| Wheat|TC254774 | Rice|TC291772 | 83 | 652 | 2.0e-97 | * |
| Wheat|TC254774 | S.officinarum|TC65003 | 79 | 763 | 4.4e-99 | * |
| Wheat|TC254774 | Sorghum|TC102557 | 79 | 763 | 2.9e-99 | * |
CLUSTAL W (1.81) multiple sequence alignment
maizest_TC281862 ---------------------------------------TTCTAGAGCAACTCTCATCCT sorgest_TC102557 AAAAAAAAAAAAAAAAAAAAAAAAATCTTGAATCCGGATTCCAGGAGCATAACTCCCGTC sugest_TC65003 ------------------------------------------------------------ best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 -------------------------------------------------GTCCCACCTCG agest_TC122735 ------------------------------------------------------------ maizest_TC281862 CACTCCCCCCACTCGCCCGCATCTTCCG-GTCTTCCTCATGGCGTCGAGCGACCTCGCCG sorgest_TC102557 CACACTACCCACTGGCCAACGCAGCACGCATCTTCCCCATGGCGTCCCGCGACCTCGCCG sugest_TC65003 ------------------------------------------------------------ best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 CCGTCGCCGCACTCCCCCCCACCATGGCGTCGCGCGACCTCGCCGAGAGCCTCCTCCCCG agest_TC122735 ------------------------------------------------------------ maizest_TC281862 AGAGCCTCCTCCCCGGCGGCGGGGGCGGAGCCTCCGCCTCACATGACGAATACGAGGAGC sorgest_TC102557 AGAGCCTCCTCTCCGGCGGCGGGGGCGGAGCCTCCGCCTCACACGACGAATACGAGGAGC sugest_TC65003 ------------------------------------------------------------ best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TGGGGGGCGGCGCCGCCACCGCCACCGCCACCGCCACCGCCCACGACGAGTACGACGAGC agest_TC122735 ------------------------------------------------------------ maizest_TC281862 GCGCGTACGACTCCGAGGACAAGATCTCCATCGCCGTGTCGGATTCCGAC---------G sorgest_TC102557 GCGCGTACGACTCCGACGACAAGGTCTCCATCGCCATCTCGGATTCCGAC---------G sugest_TC65003 ------------------------------------------------------------ best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 GCGCGTACGACTCCGACGACAAGGTCTCCATCGCCGTCTCGGACTCCGACTCGGAGGACG agest_TC122735 ------------------------------------------------------------ maizest_TC281862 GCGAAGACGACGGCACGCCGGCGTCGCGCCCGCCCTTCTCGTGGCGGAAGCTCTGGCGCT sorgest_TC102557 GCGAAGACGACGGCGCGCCGGCGTCGCGCCCACCCTTCTCGTGGCGGAAGCTCTGGCGCT sugest_TC65003 ------------------------------------------------------------ best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 GCGGCGGCGGCGGCGGCGACGCCATGCGCCCGGCCTTCTCGTGGCGCAAGCTGTGGCGGT agest_TC122735 ------------------------------------------------------------ maizest_TC281862 TCACGGGCCCGGGTTTTCTCATGTGCATCGCGTTCCTGGACCCGGGCAATCTGGAGGGGG sorgest_TC102557 TCACGGGCCCGGGTTTCCTCATGTGCATCGCGTTCCTGGACCCGGGAAACCTGGAGGGGG sugest_TC65003 ------------------------------------------------------------ best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TCACGGGGCCCGGGTTCCTCATGTGCATCGCGTTCCTCGACCCGGGGAACCTGGAGGGCG agest_TC122735 ------------------------------------------------------------ maizest_TC281862 ACCTACAGGCGGGCGCCGCGGCGGGGTACCAGCTGCTGTGGCTGCTCTTGTGGGCAACGA sorgest_TC102557 ACCTGCAGGCGGGCGCCGCCGCGGGGTACCAGCTGCTATGGCTGCTCATGTGGGCGACGG sugest_TC65003 ------------------------------------------------------------ best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 ACCTGCAGGCCGGCGCGGCGGCGGGGTACCAGCTGCTGTGGCTGCTGCTGTGGGCGACGG agest_TC122735 ------------------------------------------------------------ maizest_TC281862 TCATGGGCGCGCTGATGCAGCTGCTCTCCGCCCGGCTAGGCGTGGCCACGGGGAAGCACC sorgest_TC102557 TCATGGGCGCGCTGATGCAGCTGCTCTCCGCGCGGCTCGGCGTGGCCACGGGGAAGCACC sugest_TC65003 ------------------------------------------------------------ best_TC142215 ----------------------------------------------------GCACGAGG wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TCATGGGCGCCCTGGTGCAGCTGCTCTCCGCGCGGCTCGGGGTCGCCACGGGGAAGCACC agest_TC122735 ------------------------------------------------------------ maizest_TC281862 TCGCCGAGCTCTGCCGCCAGGAGTACCCTCCCTGGGCCACTCGCGCGCTCTGGGCCATGA sorgest_TC102557 TCGCCGAGCTCTGCCGCGAGGAGTACCCGACCTGGGCCACGCGCGCGCTCTGGGCCATGA sugest_TC65003 ------------------------------------------------------------ best_TC142215 TCGCCGAGCTCTGCCGGNAGGAGTACCCGCCCTGGGCCACCCGCGCGCTCTGGGTCATGA wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TCGCCGAGCTCTGCAGGGAGGAGTACCCGCCCTGGGCCACGCGCGCGCTCTGGGCCATGA agest_TC122735 ------------------------------------------------------------ maizest_TC281862 CGGAGCTCGCGCTCGTCGGCGCAGACATACAGGAGGTGATTGGCAGCGCGATTGCCATCA sorgest_TC102557 CGGAGCTCGCGCTCGTCGGCGCCGACATACAGGAGGTGATTGGCAGCGCGATTGCCATCA sugest_TC65003 -----------------------------------CTTCCTGG-AGAATTATGGC-GTGA best_TC142215 CGGAGCTCGCCCTCGTCGGCGCCGACATACAGGAGGTCATCGGCAGCGCGATTGCCATCA wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 CCGAGCTCGCGCTCGTCGGCGCGGACATCCAGGAGGTGATTGGCAGCGCGATTGCCATCA agest_TC122735 ------------------------------------------------------------ maizest_TC281862 AGATCCTCTCGGGGGGTGCCATACCGCTCTGGGGTGGCGTCGTCATCACCGCGCTCGATT sorgest_TC102557 AGATCCTCTCGGGGGGCACCGTGCCGCTCTGGGGTGGCGTCGTCATCACCGCGCTCGATT sugest_TC65003 GGAAACT----GGAGGCATTTT-TCGCTGTATTG-ATTGCAACTATGGCTGT-TTCATTT best_TC142215 AGATCCTCTCCGGCGGCATCGTGCCGCTCTGGGGCGGCGTCGTCATCACCGCCTTCGACT wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 AGATCCTCTCCGCTGGCACCGTCCCGCTCTGGGGCGGCGTCGTCATCACCGCGTTCGATT agest_TC122735 ------------------------------------------------------------ maizest_TC281862 GCT-TCATCTTTCTCTTCCTGGAGAATTATGGCGTGAGGAAACTCG--AGGCATTTTTCG sorgest_TC102557 GCT-TCATCTTTCTCTTCCTGGAGAATTATGGTGTGAGAAAACTGG--AGGCATTTTTCG sugest_TC65003 GCTGTTATGTTTGGTGAAACAAAGCCTAGTGGCAAGGAACTTCTGATTGGTAACTCTTCA best_TC142215 GCT-TCATCTTTCTATTCCTGGAGAACTATGGTGTGAGAAAACTGG--AAGCGTTTTTCG wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 GCT-TCATCTTTTTATTCCTGGAGAACTATGGAGTGAGAAAATTGG--AAGCATTTTTCG agest_TC122735 ------------------------------------------------------------ maizest_TC281862 CTGTACTGATTGCAACTATGGCTGTTTCATTT-GCGGT-TATGTTTGGTGAAACAA--AG sorgest_TC102557 CTGTATTGATTGCAACTATGGCTGTTTCATTT-GCGGT-TATGTTTGGTGAAACAA--AG sugest_TC65003 CTATAAC-ATGTCGGCAAAATCCTTTCCTTTTTGTTGTATATCCTTGAGAATCTAAGGAG best_TC142215 GCGTCTTGATTGCAACCATGGCTATATCATTC--GCGATCATGTTTGGTGAAACGA--AG wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 GAGTCCTGATTGCAGTCATGGCAGTATCATTT--GCAATTATGTTTGGTGAAACAA--AG agest_TC122735 ------------------------------------------------------------ maizest_TC281862 CCTAGTGGCAAGGAACTTCTGATCGGTTTGGTGGTTCCAAAATTGAGTTCAAAGACAATT sorgest_TC102557 CCTAGTGGCAAGGAACTTCTGATTGGTTTGGTGGTTCCAAAATTGAGTTCAAAGACAATT sugest_TC65003 TTTGCTCATTTGATATTTTATTCAGGTTTGGTGGTTCCAAAATTGAGTTCAAAGACAATT best_TC142215 CCTAGTGGGAAGGAGCTTCTGATCGGTTTGGTGGTTCCAAAGCTGAGCTCGAAGACTATC wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 CCAAGTGGCAAGGAGCTTCTGATTGGTTTGGTGGTTCCAAAGTTGAGTTCAAGGACAATC agest_TC122735 ------------------------------------------------------------ maizest_TC281862 AAGCAAGCGGTTGGAATTGTGGGCTGCATCATCATGCCTCACAATGTTTTCTTGCATTCA sorgest_TC102557 AAGCAAGCGGTTGGAATTGTGGGCTGCATCATCATGCCTCACAATGTTTTCTTGCATTCA sugest_TC65003 AAGCAAGCGGTTGGAATTGTGGGCTGTATCATCATGCCTCACAATGTTTTCTTGCATTCA best_TC142215 AAACAGGCGGTTGGAATTGTGGGCTGCATCATCATGCCTCATAATGTTTTCTTGCACTCG wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 AAACAAGCAGTTGGAATTGTGGGCTGCATAATCATGCCCCACAATGTCTTCTTGCACTCA agest_TC122735 ----------------------------------------------------ATACCATT maizest_TC281862 GCACTAGTGCAGTCCAGGAAGATTGACACAAACAAGAAATCTCGTGTTCTAGAAGCAGTT sorgest_TC102557 GCACTAGTGCAGTCCAGGAAGATTGACACAAACAAGAAATCTCGTGTTCAAGAAGCAGTT sugest_TC65003 GCACTAGTGCAGTCCAGGAAGATTGACACAAACAAGAAATCTCGTGTTCAAGAAGCAGTT best_TC142215 GCGCTAGTGCAGTCCAGGAAGATTGACACAAAAAAGAAATCCCGTGTTCAAGAAGCAGTT wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 GCACTAGTGCAGTCAAGGAAGATTGACACAAACAAGAAATCCCGTGTTCAAGAAGCAGTG agest_TC122735 ATACATAGGGGTTTTGATAACTGTATTAGATACACTTTCCTTCTTGTTTTTGGATAAGTA maizest_TC281862 TACTACTATAACATCGAGTCAATTCTTGCACTCATCGTGTCCTTCTTCATTAACATCTGT sorgest_TC102557 TACTACTACAACATTGAGTCAATTCTTGCACTCATTGTGTCCTTCTTTATTAACATCTGT sugest_TC65003 TACTACTACAACATTGAGTCAATTCTTGCACTCATTGTGTCCTTCTTTATTAACATCTGT best_TC142215 TACTATTACAACATTGAGTCCATCCTTGCTCTCATCATCTCCTTCTTCATTAACATCTGT wheatest_TC254774 ----------------------------------------------CCACGCGTCCGTGC lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TTCTATTACAACATTGAGTCCATTCTTGCCCTCATTGTCTCGTTCTTTATTAACATCTGT agest_TC122735 CAAACTGAGACGCCTGGAACTATTGTTTGGATTTTTGATCACTACAATGGCTGTATCGTT maizest_TC281862 GTCACAACTGTTTTTGCCAAAGGATTTTATGGGTCTAAACAG-GCTGACAGT--ATA-GG sorgest_TC102557 GTCACAACAGTTTTTGCCAAAGGATTTTATGGGTCTAAACAG-GCTGACAGT--ATA-GG sugest_TC65003 GTCACAACAGTTTTTGCCAAAGGATTTTATGGGTCTAAACAG-GCTGACAAT--ATA-GG best_TC142215 GTTACAACGGTGTTCGCTAAAGGATTTTACGGATCTGAACAAAGCTGATAACC-ATAAGG wheatest_TC254774 GTTACAACGGTATTCGCTAAAGGATTTTATGGATCCGA-CAAAGCTGATAAC--ATA-GG lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 GTCACAACAGTTTTTGCGAAAGGATTTTATGGATCTGAACAA-GCTGATGGT--ATA-GG agest_TC122735 TGGTTATCAGTACATCGTTACTGATATACCGCAAATCAATGTAATTGAAGGAATGTTCCT maizest_TC281862 TCTTGAGAATGCTGGGCAGTACT----TACAAGAA-AAATATGG-AACTGCATTCTTTCC sorgest_TC102557 TCTTGAGAATGCTGGGCAGTACT----TACAGGAA-AAATATGG-AACTGCATTCTTTCC sugest_TC65003 TCTTGAGAATGCTGGGCAGTACT----TACAGGAA-AAATATGG-AACTGCATTCTTTCC best_TC142215 TCTTGAGAATGCTGGCCAGTACT----TACAGGAAGAAATATGGGAACTGCCCTGTTTCC wheatest_TC254774 TCTTGAGAATGCTGCCCAGTACT----TACAGGAGGAAATATGG-AACTCCCCTGTTTCC lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TCTTGAGAATGCTGGACAGTACT----TACAGCAG-AAATATGG-GACTGCATTCTTTCC agest_TC122735 TCCTTGGTCTTCTGATTACCGCCCCGGTACACTGCTGCAGGCTGTGGGTATAATCGGTGC maizest_TC281862 CA-TCCTCTATATCT-GGGCTGTTGGTTTGTTAGCATCT-GGGCAGAGTAGCACAATTAC sorgest_TC102557 CA-TCCTCTATATCT-GGGCTATTGGTTTGTTAGCATCT-GGGCAGAGTAGCACAATTAC sugest_TC65003 CA-TCCTCTATATCT-GGGCTATTGGTTTGTTAGCATCT-GGGCAGAGTAGCACAATTAC best_TC142215 TNGTCCTCTATATAT-GGGCTATCGGGTTGTTAGCGTCT-GGACAGAGTAGCACGATCAC wheatest_TC254774 TG-TCCTCTATATCTTGGGCTATCGGGTTGTTAGCGTCTTGGACAGAGCAGCACGATCAC lsest_TC12392 -------------------------------------------CAGAGTAGTACAATTAC ricest_TC291772 TA-TACTGTATATCT-GGGCTATTGGGCTGTTAGCATCT-GGACAGAGTAGCACTATTAC agest_TC122735 CGTTATCATGCCGCACAACTTATATTTACATTCAGCGCTTGTAAAGTCTCGTACAATCAA maizest_TC281862 T-GGCACATATGCAGGACAGTTTGTTATGGGAGGTTTCCTTAATCTTCGATTGAAGAAGT sorgest_TC102557 T-GGCACATATGCAGGACAATTTGTTATGGGAGGCTTCCTTAATCTTCGATTGAAGAAGT sugest_TC65003 T-GGCACATACGCAGGACAATTTGTTATGGGAGGTTTCCTTAATCTTCGATTGAAGAAGT best_TC142215 C-GGCACATATGCAGGCCAATTCGTCATGGGAGGTTTCCTTAATCTTCGATTGAAGAAGT wheatest_TC254774 TTGGCACATATGCAGGCCAATTTGTCATGGGAGGTTTCCTTAATCTTCGATTGAAGAAGT lsest_TC12392 G-GGCACCTATGCCGGGCAGTTTATTATGGGTGGGTTTCTTGATTTGAGATTGAAGAAGT ricest_TC291772 T-GGCACATATGCAGGCCAATTTGTTATGGGAGGCTTCCTTAATCTTCGGTTGAAGAAGT agest_TC122735 TCGAAACA-ATGTTAAAGAAGTGAAAAAGGCAAATCGTTATTACTTT--ATAGAAGCATC maizest_TC281862 GGCTACGGGCAATGATTACTCGAAGTTTTGCCATTATTCCAACTATGATTGTGGCTTTAT sorgest_TC102557 GGCTACGAGCAATGATTACTCGAAGTTTTGCCATTATTCCAACTATGATTGTGGCTTTAT sugest_TC65003 GGCTACGAGCAATGATTACTCGAAGTTTTGCCATTATTCCAACTATGAGTGTGGCTTTAT best_TC142215 GGTTACGAGCAGTGATTACTCGAAGCTTTGCCATTATTCCGACTATGATTGTGGCTTTAT wheatest_TC254774 GGTTACGAGCAGTGATTACTCGAAGCTTTGCCATTATTCCGACTATGATTGTGGCTTTAT lsest_TC12392 GGGCCCGGGCTTTGATTACTAGAAGTTGTGCTATTGTTCCTACTTTGATTGTTGCTTTGA ricest_TC291772 GGTTAAGAGCAATGATTACTCGAAGCTTTGCAATTATTCCAACTATGATTGTGGCTTTAT agest_TC122735 GATTGCCC-------TTGCTGTATCCTTTGTCATTAACGTGTTTGTAGTGTCCGTGTTCG maizest_TC281862 TTTTCGATACTGAAGATCCTACTATGGACATTCTGAATGAAGCACTCAATG-TTCTTCAG sorgest_TC102557 TTTTCGATACTGAAGATCCTACTATGGATATTCTGAATGAAGCACTCAATG-TTCTTCAA sugest_TC65003 TTTTCGATACTGAAGATCCTACTATGGATATTCTGAATGAAGCACTCAATG-TTCTTCAA best_TC142215 TTTTTGATACTGAAGATCCTACCATGGACGTTCTGAATGAGTCGCTCAATG-TTCTTCAG wheatest_TC254774 TTTTTGATACTGAAGATCCTACCATGGACGTTCTGAATGAGTCGCTCAATG-TTCTTCAG lsest_TC12392 CTTTTGATGGTTCTGAGGATACTTTGGATGGTCTTAATGAATGGCTTAATG-TGCTTCAA ricest_TC291772 TTTTTGACACGGAGGATCCTACAATGGACATTCTGAATGAGGCACTCAATG-TTCTTCAA agest_TC122735 CTCATGATGTGTATGGAAAGACTAATCAAGACGTGATTGACGCTTGCAGTAATTCATCAT maizest_TC281862 T--CCATACAGATTCCGTTTGCTCTAATTCCTCTCATCACCCTCGTTTCAAAGGAGCAAA sorgest_TC102557 T--CCATACAGATTCCATTTGCTCTAATTCCTCTCATCACCCTCGTTTCAAAGGAGCAAA sugest_TC65003 T--CCATACAGATTCCATTTGCTCTAATTCCTCTCATCACCCTCGTTTCAAAGGAGCAAA best_TC142215 T--CCATTCAGATTCCATTTGCACTAATTCCTCTCATCACCCTTGTTTCGAGTGAGCAGC wheatest_TC254774 T--CCATTCAGATTCCATTTGCACTAATTCCTCTCATCACCCTTGTTTCGAGTGAGCAGC lsest_TC12392 T--CGGTTCAAATTCCTTTTGCTCTCATTCCGTTGCTGTGTTTGGTGGCTAAAGAGGATC ricest_TC291772 T--CCATACAGATACCATTTGCACTGATTCCTCTCATCACACTTGTCTCAAAGGAGCAAG agest_TC122735 TTGCGGATGACATTATATCTGCATTTATAGCAAATAATTATACAGCCGATATCAACATTT maizest_TC281862 TCATGGGGTCGTTCGTAATTGGTCCCATCACCAAAGTGATTAGCTGGATTGTTACGGTAT sorgest_TC102557 TCATGGGATCGTTCGTAATTGGTCCCATCACCAAAGTGATTAGCTGGATTGTTACAGTAT sugest_TC65003 TCATGGGGTCGTTTGTAATTGGTCCCATCACCAAAGTGATTAGCTGGATTGTTACGGTAT best_TC142215 TCATGGGGTCATTCGTGGTTGGTCCTATCACAAAAGTGATAAGTTGGATCGTCACAATCT wheatest_TC254774 TCATGGGGTCATTCGTGGTTGGTCCTATCACCAAAGTGATAAGTTGGATCGTCACAATCT lsest_TC12392 TCATGGGCGTTTTCGTAATTGGACGTTTTCTAAAGACAATCTCGTGGCTTGTGGCGGCTT ricest_TC291772 TCATGGGATCATTTGTGGTTGGTCCTATCACAAAAGTGATTAGCTGGATTGTTACAGTAT agest_TC122735 ATAAAGGCGGATTAGTACTTGGATGTTTTTATGGTGGACTATCGATGTACGTGTGGGCTA maizest_TC281862 TTCTGATGCTTATCAACGGGTATCTTATACTATCTTTCTACATTACTGATGTCCGGGGTG sorgest_TC102557 TTCTGATGCTTATCAACGGGTATCTTATACTGTCTTTCTACATTACTGATGTCCGGGGTG sugest_TC65003 TTCTGATGCTTATCAACGGGTATCTTATACTGTCTTTCTACATTGCTGATGTCCGGGGTG best_TC142215 TTTTGATGCTCATCAACGGATACCTCATACTGTCCTTCTACACCGAGGAAGTGCGGGGCG wheatest_TC254774 TTCTGATGCTCATCAACGGATACCTCATCCTGTCCTTCTACACCAACGAAGTGCGGGGCG lsest_TC12392 TGGTGATAGCAATAAATGGTTACCTATTACAACAATTTTTTGCCGAAGAAGTAAGCGGGC ricest_TC291772 TCTTGATGCTCATCAATGGGTATCTTATACTGTCCTTCTATGCCACTGAAGTCCGGGGAG agest_TC122735 TTGGTATACTAGCAGCTGG-------ACAAAGTTCTACTATGACTGGCACATACGCAGGA maizest_TC281862 CATTGCTTCGCTCAAGCTTGTGTG---TTGTGTTGGTTGTTTACCTTGCATTCATCGTCT sorgest_TC102557 CATTGCTTCGCTCAAGCTTGTGTA---TTGTGTTGATTGTTTACCTTGCATTCATCGTCT sugest_TC65003 CATTGCTTCGCTCAAGCTTGTGTG---TTGTGTTGATTGTTTACCTTGCATTCATCGTCT best_TC142215 CAGTTGTTCGCTCAAGCTTGTGCG---TCGTGCTGGCTGTTTACCTCGCCTTCATTGTCT wheatest_TC254774 CAGTCGTTCGTTCAAGCTTGTGCG---TCGTGCTGGCTGTTTACCTCGCGTTCATCATCT lsest_TC12392 CCGCGTTTACTTCAACAGTCGTCA---TTTTCACGGTTGCATATGTTGCATTCATTGTAT ricest_TC291772 CATTGGTTCGGTCAAGCTTGTGCG---TTGTATTGGCAGTTTACCTTGCATTCATCGTCT agest_TC122735 CAATTTGCTATGGAGGGTTTTCTTAACCTGCAATGGGCACGTTGGAAGCGTGTATTGTTC maizest_TC281862 ATCTTATTGTGCGAAATACTTCGCTGTATTCTCGCCTTTGCTCA-TCAACGTCAAAGAGC sorgest_TC102557 ATCTTATTGTGCGAAATACTTCGCTGTATTCTCGCCTTTGCTCA-TCTATGTCAAAGAGC sugest_TC65003 ATCTTATTGTGCGAAATACTTCGCTGTATTCTCGCCTTTGCTCA-TCAATGTCAAAGAGT best_TC142215 ACCTCATCTTGAGGAACACCACGCTGTATTCTCGCCTTCGCTCA-TCAGTCTCAAAGAGC wheatest_TC254774 ACCTGATCCTGAGGAACACCACGCTGTATTCCCGCCTTCGCTCA-TCAGTCTCAAAGAGC lsest_TC12392 ATCTTATTTGGAGAAGTGTTGT----TGGTTCCGCATTCGTCCAATCAAGAGAAGTTGAC ricest_TC291772 ATCTTATCATGCGAAATACCTCACTGTATTCTCGCCTCCGCTCA-GCAATGACAAAGAGC agest_TC122735 ACCAGAACAGTGGCAATCATGC-CTGCGTTTTATGTTGCTTTCT-TCAGTAGATTGGAAG maizest_TC281862 TCGTGAG---------CA----TTTCAACATCGTCAT----------------------- sorgest_TC102557 CCATGAG---------CG----TTTCAGCATTGTCAT----------------------- sugest_TC65003 TCATGAG---------CG----TTTCAGCATCGTCAT----------------------- best_TC142215 TCATGAG---------AAAGACTGTTAGTCATTTCAT----------------------- wheatest_TC254774 TCATGAG---------AAAGAGTGTTAGTCATTTCAT----------------------- lsest_TC12392 CCAAGAA---------AAACGGGTCGGGTCAGGGAAG----------------------- ricest_TC291772 ACATGAGCGCCTTCAGAAGTTTTTTGAACAAAAAAAGGGCAGGACAATTCCCTTATCGGC agest_TC122735 ATTTAACTAAAATGAACGATATATTGAATGCCGTGATGG--------------------- maizest_TC281862 CTGC-TGCTTT----GATGGACTGGAACAGT--------------------GCTGTCCAT sorgest_TC102557 CTGC-CGCCAT----GATGGGCTGGAACAGTTTGGATTATACCTGAAGAAAACTGTCCAT sugest_TC65003 CTAC-CGCCGT----GATGGGCTGGAACAGTTTGGATTATACCGGAAGAAAACTGTCCAT best_TC142215 CTCCACGATGAAGAAGATGAGCGGAAGTGGGT-AGATAATATTGGAAGAAAACTGCTCCC wheatest_TC254774 CTCCATGATGAAGAAGATGAACGGGAATGGAT-AGATAATATTGGGAGAAAGCTGCTCCC lsest_TC12392 CCCTAAGATACT---ATTCAATCGAATCCACT--------ATCGCACTTGCTATTTCCTT ricest_TC291772 CTTCAGAACTGTTAGTTTCTACCATGGTGAAGCAGATCATATTAGAAGAAAGATGCTCCC agest_TC122735 CTTTACAGCTTC---CATTCGCTGCGATACCT-----------ACAGTCGCCTTTTCTTC maizest_TC281862 CCATGCAAAGCTTGT-GCTGCTGCT-TATTT--ATTGGCTTCAC---AGAAGACTATGTA sorgest_TC102557 CCATGCAAAGCTTGT-GCTGCTGCT-TATTT--ATTGGCTACAG---AGAAGTATATATA sugest_TC65003 CCATGCAAAGCTTGT-GCAGCTGCT-TATTT--ATTGGCTACAG---AGAAGTATATATA best_TC142215 CATTGTACAACATGT-ACGGCTGCC-TATTTGTATTAGCTCCGGGGGAGAGGTCTATAT- wheatest_TC254774 CAGTGTACAACCTGT-ACGGCTGCC-TATTTGTATTAGCTCCGGGGGAGAGGTCTATAT- lsest_TC12392 TTTCATAAATCTTTTAGTAACAACCGTATTTGCAAAGGCCTTTTTTGGAACTGGAATAGC ricest_TC291772 CCATGTAAAAACTTGTACTACTGCC-TGCTTGTATTAGCTCCAG---GAAGAAGCATAGT agest_TC122735 AAGTTTAGCATTGATGAAAGCAGAC---TTTGTGAATGGCAGACTTGAAAAAATTATCTC maizest_TC281862 TGCATATCCCGTGTATGCTTGTGTTTATGGGATATTTGATAGTAGGGCTTCTTCCCTTT- sorgest_TC102557 TGCATATCCCTTGTATGCTTGTATTTATGGGATATTCGTTAGTAGGACTTCTCCTATAGG sugest_TC65003 TGCATATCCCTTGTATGCTTGTATTTATGGGATATTTGGTAGTAGGGCTTCTCGTATAGG best_TC142215 TGTATATCAGTTGC-TG-CTGTATAACTGTATTTGTGGATTAGCAGGCTTCCCCTTTAGG wheatest_TC254774 TGTACATCAGTTGC-TG-TTGTATAACTGTATTTGTGGATTAGCAGGCTTCCCCTTTAGG lsest_TC12392 CGATAAAATCGGGCTCGGGAACGCGGGTCAGTTTCTTGA-AGAAAGATTTGGCGGCGGNG ricest_TC291772 AAAAAAGTCTATTTGTATTAGCTCCAGGAAGAAGCCT-ACCGATGAACTACACTG-TATA agest_TC122735 TATCACACTCAGTTTTACTGTTATTGGTATAAACCTTTATTTTATTGTGGCCAATTTAGA maizest_TC281862 -TAGGATGCTATAT------TCACCTCC--AGGCACACGT--TGCAGATAGATTTCTTAT sorgest_TC102557 ATGGGCTAATGTACCTCCAGTCACATACTAGGGTACACGT--AGCAGATAGATTTCTTAT sugest_TC65003 ATGGGCTAATGTACCTCCAGTCACATACTAGGGTACACGT--AGCAGATAGATTTCTTAT best_TC142215 CCTCGTTCGGCACTAGGGTATTG------------------------------------- wheatest_TC254774 ATTGGGCTAAACC----------------------------------------------- lsest_TC12392 TGGTGCCGATTTTGTATATTTGGGCAGTCGGGTTGCTGGC--AGCCGGGCAGAGTAGTAC ricest_TC291772 TTCCTCTGCTGTTGTATAAGTGCATTAGCGAATTGGTTG---GGCTTCTCCACTTAGGGT agest_TC122735 GCAAGTAAATTTAACACCTTTGATGATCTTTGGCGTTGTTTTGTTCGGTATGTTTTACAT maizest_TC281862 TTCTGAGGTTTATGGTGATGTGAAAAGACTACTGGCAAAAAAAAAC---------TGGCA sorgest_TC102557 TTCTGAGGATTATGGTGATGTTAAAACACTATTGACAAGAAATGGCATTGCCAGATAACT sugest_TC65003 TTCTGAGGATTATGGTGATGTGAAAACACTATTGACAAAAAATGGCATTGCCAGATAGCT best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 AATTACGGGCACCTATGCCGGGGCAGTTATTATGG------------------------- ricest_TC291772 TGGGATAAACCACAGTGGCATTCATGTGTTTGAGGTTATAAACAGCAGTAGATAACTTTG agest_TC122735 AGCTTTTAATTTGTATCTTCTATTGCATATGATGGTAAATTTAGGAAATAAAGCAGTAGC maizest_TC281862 TTGCTG-------TTCCTCCTGAAACTGAGCAGATGAAATTTACTGAATGATCTGTAAAG sorgest_TC102557 CAGGTGCCACGATTTCCTCCTGGAACTGAGCAGACGAAATTTACCGAATGATCTG--AAG sugest_TC65003 CAAGTGCCATGATTTCCTCCTGGAACTTAGCAGACGAAATTTACCGAATGATCTGTAAAG best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TTACCTTTCTCATTTTTTGGATGATGATGATCTGCAGAATTGCTGTTGACACTTGGAACT agest_TC122735 TTCAAATTGGGTAAGTTTCATTATT----------------------------------- maizest_TC281862 CTCGATGTTGAAGTTCTG------------------------------------------ sorgest_TC102557 TTTGATGTTGCAAACCTGGATTCCAGGAG--CAATGCATATTCTAATGAGCTGTACTTTG sugest_TC65003 TTTGATGTTGCAGTCCTGGATTCCAGGAATTCAATGCATATGCTGCTGCAGCTTGAATGG best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 TCTGAACAGTCAGGAATCATTGTTGCACTTGCTGAATTTCTTCCTGGTTTTTCATGATC- agest_TC122735 ------------------------------------------------------------ maizest_TC281862 ------------------------------------------------------------ sorgest_TC102557 TGATCTATCTTAAGGTCACAGCCCTGTTCCAAATTTAATATTAGACCATAAACTTATCTT sugest_TC65003 AATGTCG----------------------------------------------------- best_TC142215 ------------------------------------------------------------ wheatest_TC254774 ------------------------------------------------------------ lsest_TC12392 ------------------------------------------------------------ ricest_TC291772 ------------------------------------------------------------ agest_TC122735 ------------------------------------------------------------ maizest_TC281862 ------- sorgest_TC102557 CAAGTCC sugest_TC65003 ------- best_TC142215 ------- wheatest_TC254774 ------- lsest_TC12392 ------- ricest_TC291772 ------- agest_TC122735 -------Click button to view the alignment with 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| Acknowledgements | |
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The Gene Index Project is supported in part by funding from the US National Science Foundation through grant #DBI-0552416. |
 
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