Tentative Ortholog 1112877

# TC Putative function
1. Fugu Fugu|TC3664(P51669) Ubiquitin-conjugating enzyme E2-17 kDa 2 (Ubiquitin-protein ligase)
2. H.red_tail_sheller H.red_tail_sheller|TC546Ubiquitin-conjugating enzyme E2-17 kDa 2 () (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
3. Petunia Petunia|TC564(Q7XR79) OSJNBa0043A12.6 protein
4. Spruce Spruce|TC24622AT4g27960 (exp=-1; wgp=0; cg=0)

Sequence1 Sequence2 % Identity Match length p-value Recip. best hits
H.red_tail_sheller|TC546Fugu|TC3664822823.1e-37*
Petunia|TC564Fugu|TC3664732652.3e-24*
Petunia|TC564H.red_tail_sheller|TC546733225.8e-31*
Spruce|TC24622Fugu|TC3664722952.5e-26*
Spruce|TC24622H.red_tail_sheller|TC546733471.3e-32*
Spruce|TC24622Petunia|TC564745091.4e-55*

CLUSTAL W (1.81) multiple sequence alignment 


petunest_TC564       ------------------------------------------------------------
spruest_TC24622      ------------------------------------------------------------
fest_TC3664          ------------------------------------------------------------
hsest_TC546          GAGTTGGCCAGCGGCACCGACCGAAACCAACAGCAGAAGAGAGCTTTGTCGACCGGGTTA

petunest_TC564       ------------------------------------------------------------
spruest_TC24622      ------------------------------------------------------------
fest_TC3664          ------------------------------------------------------------
hsest_TC546          CGCCACCTGGCACTCGCACTTATTCGGCATTGATTTTTGGGTTAGGTTTAATCCGATATA

petunest_TC564       ------------------------------------------------------------
spruest_TC24622      -CCCCCCCCCCCCCCCCCGAAGGACGGCAGAGTAACCTTTTGTGTTGGGGTTTGTTTGCC
fest_TC3664          --------------------------------TAGGTGGAAGGACCGCGGTTCTACCGTC
hsest_TC546          AGACGTGTAATTCACGAGGAAAGTGAGCGTTATTGAGGGAGTGTGCAACATTTGACGTTT

petunest_TC564       ------------------------------------------------------------
spruest_TC24622      TTAAGAACCGAGTCGGGGAGTATTTTAATATTCAAGGCGCGCCTGAGCTGTGTAAGGCGC
fest_TC3664          TGTATTTCACTTTCGC--CTTGAATTGTACTGTTGATTATTTCTGGTAGCTATTATTAGA
hsest_TC546          AACACCGCGCATACGTAGTTTGAGCTTGCTAGCCGGCTAACTCTGCTAGCCAGAGAAAGG

petunest_TC564       ------------------------------------------------------------
spruest_TC24622      CTGTGTATTGGGTTCTTTTGTCTTTAAAATCCCAGGAGGTTTTTCGGTGTGAATATCGTA
fest_TC3664          TTGTTTGTACAGCAGCGTTGTTCTATGAT-AGCGAACTCAT-AACAGTACCTACGGCCAG
hsest_TC546          AAAAAAGC-CGTCGGGTTTGACCTACCGTCAGTTATTTCACCGAGAGCGAAGCATCTCTG

petunest_TC564       --------------------------------------------TAAGATT-CTGTTATG
spruest_TC24622      TTTGATCAGGT-CTGTTTTGGGGGATTGTTTCCGCAGAGAGATCCGCAATTGCTCGAATG
fest_TC3664          TGACATCAATCGCCATTTTAATTGCACGTTTTCCCTGACAGAACCGCTAGCACAACAATG
hsest_TC546          TTTCTTCGTTTGGGATCGAAACACCGCCAACTTAGAGAGCAGAACACCAAGACAG-GATG

petunest_TC564       GCTTCAAAAAGGATCCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCTTGC
spruest_TC24622      GCTTCTAAGCGCATACTGAAGGAATTGAAGGACCTGCAGAGAGACCCGCCTACGTCGTGC
fest_TC3664          GCTCTGAAAAGAATTCACAAGGAGTTGAATGACTTGGCACGGGACCCTCCGGCCCAGTGT
hsest_TC546          GCTCTGAAAAGGATTCACAAGGAGCTTAACGACCTGGCTCGTGACCCTCCAGCACAGTGC

petunest_TC564       AGTGCTGGTCCTGTTGGTGAGGATATGTTCCACTGGCAAGCTACGATCATGGGTCCTTCC
spruest_TC24622      AGCGCAGGCCCTGTGGCTGAAGATATGTTTCACTGGCAAGCGACAATTATGGGTCCTAGT
fest_TC3664          TCTGCAGGACCTGTAGGAGATGATATGTTTCACTGGCAAGCCACAATAATGGGACCTAAC
hsest_TC546          TCAGCTGGCCCAGTGGGTGATGATATGTTTCACTGGCAAGCCACAATCATGGGGCCTAGT

petunest_TC564       GACAGCCCATTTGCTGGAGGTGTCTTCCTTGTGTCCATCCATTTTCCCCCAGATTATCCA
spruest_TC24622      GATAGTCCGTACGCAGGAGGTGTTTTTTTAGTTACTATTCATTTTCCACCTGACTACCCA
fest_TC3664          GACAGTCCTTACCAGTGCGGGGTATTCTTTTTGACCATACATTTCCCCACAGACTACCCC
hsest_TC546          GACAGTCCATATCAGGGAGGTGTTTTCTTCTTGACGATTCATTTTCCAACAGACTACCCC

petunest_TC564       TTCAAGCCCCCGAAGGTTTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAATAGCAAT
spruest_TC24622      TTCAAGCCTCCAAAAGTTGCCTTCAGAACAAAAGTATTCCATCCAAATATCAATAGCAAT
fest_TC3664          TTCAAACCGCCAAAGGTTGCATTTACCACAAGAATCTACCACCCAAATATCAACAGCAAT
hsest_TC546          TTCAAACCCCCCAAGGTTGCATTTACAACAAGAATTTACCACCCAAATATTAACAGTAAC

petunest_TC564       GGTAGTATTTGTCTGGACATCCTCAAAGAACAATGGAGCCCTGCTCTTACCGTATCCAAG
spruest_TC24622      GGGAACATTTGTCTGGACATTCTCAAAGAGCAATGGAGTCCTGCATTAACTATTTCAAAG
fest_TC3664          GGCAGCATTTGTCTTGACATCCTG------------------------------------
hsest_TC546          GGCAGTATCTGTCTGGATATTCTCAGATCACAATGGTCTCCTGCGCTTACTATTTCTAAA

petunest_TC564       GTACTGCTTTCCATTTGCTCCTTGCTTACTGATCCGAATCCAGATGATCCTTTAGTGCCA
spruest_TC24622      GTATTGCTGTCGATATGCTCATTGCTCACTGACCCGAATCCAGATGATCCTTTGGTTCCT
fest_TC3664          ------------------------------------------------------------
hsest_TC546          GTTCTTCTCTCCATTTGCTCACT-------------------------------------

petunest_TC564       GAGATTGCTCACATGTATAAGACTGATAGAGTGAAGTATGAGAGTACTGCTAGATCTTGG
spruest_TC24622      GAAATTGCACATATGTACAAGAATGACAAGGGGAAGTATGAGGCTACTGCACGCAATTGG
fest_TC3664          ------------------------------------------------------------
hsest_TC546          ------------------------------------------------------------

petunest_TC564       ACCCAGAAATATGCGATGGGATGAACACATTTGGTTGCAGTTCCATGAATATCAGACCTT
spruest_TC24622      ACCCAAAAATATGCAATGGCCTAAATTAATAGCAATGTAATCCAGTTA-TGCGATGGCCT
fest_TC3664          ------------------------------------------------------------
hsest_TC546          ------------------------------------------------------------

petunest_TC564       TATGCTATAGTAGTA-AATAAAAATAG----------GCATGGA-GCACAATTTTCTGAT
spruest_TC24622      AAATTAATAGTAATGTAATCCAGTTATCTCCCCTCATATTTGAATACATGGTTTTTATTT
fest_TC3664          ------------------------------------------------------------
hsest_TC546          ------------------------------------------------------------

petunest_TC564       ATTG-GACTTGTGTT----ATCTGATATTGTGTCCTC-CTTTGTTCGACTGGTTAAATAT
spruest_TC24622      GTGGAGACTCCAACTTTAAATAAAATATTATATTTTTTCCTTTTACCGCTGGTTTGTCAT
fest_TC3664          ------------------------------------------------------------
hsest_TC546          ------------------------------------------------------------

petunest_TC564       CTATCATTTGGTTAAAGTC-----------------------------------------
spruest_TC24622      ATCACATAAAAATGTAGCATGGTTGAAGTGGCGATCTTACATCGGATAAAAATGTAGGAT
fest_TC3664          ------------------------------------------------------------
hsest_TC546          ------------------------------------------------------------

petunest_TC564       ------------------------------------------------------------
spruest_TC24622      GGTTGTAGTGAATATTTACCATCGCACAAAAATGTATGGTTGTAGTAATATCTTCAAAAA
fest_TC3664          ------------------------------------------------------------
hsest_TC546          ------------------------------------------------------------

petunest_TC564       -------------------
spruest_TC24622      ATAGTGATTACTTCCCCCG
fest_TC3664          -------------------
hsest_TC546          -------------------
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Acknowledgements
   The Gene Index Project is supported in part by funding from the US National Science Foundation through grant #DBI-0552416.